Plant vision source code may be downloaded from here.

If you use the code, please cite to the papers:

Plant Vision

Plant vision source code may be downloaded from here.

If you use the code, please cite to the papers:

Publications

  • Joint Multi-Leaf Segmentation, Alignment, and Tracking from Fluorescence Plant Videos
    Xi Yin, Xiaoming Liu, Jin Chen, David M. Kramer
    IEEE Transactions on Pattern Analysis and Machine Intelligence, Vol. 40, No. 6, pp.1411-1423, , Jul. 2017 (in press)
    Bibtex | PDF | arXiv | Project Webpage
  • @article{ joint-multi-leaf-segmentation-alignment-and-tracking-from-fluorescence-plant-videos,
      author = { Xi Yin and Xiaoming Liu and Jin Chen and David M. Kramer },
      title = { Joint Multi-Leaf Segmentation, Alignment, and Tracking from Fluorescence Plant Videos },
      booktitle = { IEEE Transactions on Pattern Analysis and Machine Intelligence },
      volume = { 40 },
      number = { 6 },
      month = { July },
      year = { 2017 },
      pages = { 1411--1423 },
    }
  • Multi-modality Imagery Database for Plant Phenotyping
    Jeffrey A. Cruz, Xi Yin, Xiaoming Liu, Saif M. Imran, Daniel D. Morris, David M. Kramer, Jin Chen
    Machine Vision and Applications, Vol. 7, pp.1-15, , Jul. 2016 (equal contribution by first two authors)
    Bibtex | PDF | Project Webpage
  • @article{ multi-modality-imagery-database-for-plant-phenotyping,
      author = { Jeffrey A. Cruz and Xi Yin and Xiaoming Liu and Saif M. Imran and Daniel D. Morris and David M. Kramer and Jin Chen },
      title = { Multi-modality Imagery Database for Plant Phenotyping },
      booktitle = { Machine Vision and Applications },
      volume = { 7 },
      month = { July },
      year = { 2016 },
      pages = { 1--15 },
    }
  • Leaf Segmentation in Plant Phenotyping: A Collation Study
    Hanno Scharr, Massimo Minervini, Andrew P. French, Christian Klukas, David M. Kramer, Xiaoming Liu, Imanol L. Muntion, Jean-Michel Pape, Gerrit Polder, Danijela Vukadinovic, Xi Yin, Sotirios A. Tsaftaris
    Machine Vision and Application, Vol. ['27', '7'], No. 4, pp.585-606, , May. 2016
    Bibtex | PDF | Project Webpage
  • @article{ leaf-segmentation-in-plant-phenotyping-a-collation-study,
      author = { Hanno Scharr and Massimo Minervini and Andrew P. French and Christian Klukas and David M. Kramer and Xiaoming Liu and Imanol L. Muntion and Jean-Michel Pape and Gerrit Polder and Danijela Vukadinovic and Xi Yin and Sotirios A. Tsaftaris },
      title = { Leaf Segmentation in Plant Phenotyping: A Collation Study },
      booktitle = { Machine Vision and Application },
      volume = { ['27', '7'] },
      number = { 4 },
      month = { May },
      year = { 2016 },
      pages = { 585--606 },
    }
  • Multi-Leaf Tracking from Fluorescence Plant Videos
    Xi Yin, Xiaoming Liu, Jin Chen, David M. Kramer
    In Proceedings of IEEE Conference on Image Processing (ICIP 2014), Paris, France, Oct. 2014 (Top 10% Paper Award)
    Bibtex | PDF | Project Webpage
  • @inproceedings{ multi-leaf-tracking-from-fluorescence-plant-videos,
      author = { Xi Yin and Xiaoming Liu and Jin Chen and David M. Kramer },
      title = { Multi-Leaf Tracking from Fluorescence Plant Videos },
      booktitle = { In Proceedings of IEEE Conference on Image Processing },
      address = { Paris, France },
      month = { October },
      year = { 2014 },
    }
  • Multi-Leaf Alignment from Fluorescence Plant Images
    Xi Yin, Xiaoming Liu, Jin Chen, David M. Kramer
    Proc. IEEE Winter Conference on Application of Computer Vision (WACV 2014), Steamboat Springs, USA, Mar. 2014 (Best Student Paper Award)
    Bibtex | PDF | Project Webpage
  • @inproceedings{ multi-leaf-alignment-from-fluorescence-plant-images,
      author = { Xi Yin and Xiaoming Liu and Jin Chen and David M. Kramer },
      title = { Multi-Leaf Alignment from Fluorescence Plant Images },
      booktitle = { Proc. IEEE Winter Conference on Application of Computer Vision },
      address = { Steamboat Springs, USA },
      month = { March },
      year = { 2014 },
    }
  • Joint Multi-Leaf Segmentation, Alignment, and Tracking from Fluorescence Plant Videos
    Xi Yin, Xiaoming Liu, Jin Chen, David M. Kramer
    IEEE Transactions on Pattern Analysis and Machine Intelligence, Vol. 40, No. 6, pp.1411-1423, , Jul. 2017 (in press)
    Bibtex | PDF | arXiv | Project Webpage
  • @article{ joint-multi-leaf-segmentation-alignment-and-tracking-from-fluorescence-plant-videos,
      author = { Xi Yin and Xiaoming Liu and Jin Chen and David M. Kramer },
      title = { Joint Multi-Leaf Segmentation, Alignment, and Tracking from Fluorescence Plant Videos },
      booktitle = { IEEE Transactions on Pattern Analysis and Machine Intelligence },
      volume = { 40 },
      number = { 6 },
      month = { July },
      year = { 2017 },
      pages = { 1411--1423 },
    }
  • Multi-modality Imagery Database for Plant Phenotyping
    Jeffrey A. Cruz, Xi Yin, Xiaoming Liu, Saif M. Imran, Daniel D. Morris, David M. Kramer, Jin Chen
    Machine Vision and Applications, Vol. 7, pp.1-15, , Jul. 2016 (equal contribution by first two authors)
    Bibtex | PDF | Project Webpage
  • @article{ multi-modality-imagery-database-for-plant-phenotyping,
      author = { Jeffrey A. Cruz and Xi Yin and Xiaoming Liu and Saif M. Imran and Daniel D. Morris and David M. Kramer and Jin Chen },
      title = { Multi-modality Imagery Database for Plant Phenotyping },
      booktitle = { Machine Vision and Applications },
      volume = { 7 },
      month = { July },
      year = { 2016 },
      pages = { 1--15 },
    }
  • Leaf Segmentation in Plant Phenotyping: A Collation Study
    Hanno Scharr, Massimo Minervini, Andrew P. French, Christian Klukas, David M. Kramer, Xiaoming Liu, Imanol L. Muntion, Jean-Michel Pape, Gerrit Polder, Danijela Vukadinovic, Xi Yin, Sotirios A. Tsaftaris
    Machine Vision and Application, Vol. ['27', '7'], No. 4, pp.585-606, , May. 2016
    Bibtex | PDF | Project Webpage
  • @article{ leaf-segmentation-in-plant-phenotyping-a-collation-study,
      author = { Hanno Scharr and Massimo Minervini and Andrew P. French and Christian Klukas and David M. Kramer and Xiaoming Liu and Imanol L. Muntion and Jean-Michel Pape and Gerrit Polder and Danijela Vukadinovic and Xi Yin and Sotirios A. Tsaftaris },
      title = { Leaf Segmentation in Plant Phenotyping: A Collation Study },
      booktitle = { Machine Vision and Application },
      volume = { ['27', '7'] },
      number = { 4 },
      month = { May },
      year = { 2016 },
      pages = { 585--606 },
    }
  • Multi-Leaf Tracking from Fluorescence Plant Videos
    Xi Yin, Xiaoming Liu, Jin Chen, David M. Kramer
    In Proceedings of IEEE Conference on Image Processing (ICIP 2014), Paris, France, Oct. 2014 (Top 10% Paper Award)
    Bibtex | PDF | Project Webpage
  • @inproceedings{ multi-leaf-tracking-from-fluorescence-plant-videos,
      author = { Xi Yin and Xiaoming Liu and Jin Chen and David M. Kramer },
      title = { Multi-Leaf Tracking from Fluorescence Plant Videos },
      booktitle = { In Proceedings of IEEE Conference on Image Processing },
      address = { Paris, France },
      month = { October },
      year = { 2014 },
    }
  • Multi-Leaf Alignment from Fluorescence Plant Images
    Xi Yin, Xiaoming Liu, Jin Chen, David M. Kramer
    Proc. IEEE Winter Conference on Application of Computer Vision (WACV 2014), Steamboat Springs, USA, Mar. 2014 (Best Student Paper Award)
    Bibtex | PDF | Project Webpage
  • @inproceedings{ multi-leaf-alignment-from-fluorescence-plant-images,
      author = { Xi Yin and Xiaoming Liu and Jin Chen and David M. Kramer },
      title = { Multi-Leaf Alignment from Fluorescence Plant Images },
      booktitle = { Proc. IEEE Winter Conference on Application of Computer Vision },
      address = { Steamboat Springs, USA },
      month = { March },
      year = { 2014 },
    }